mpi
Adds MPI (Message Passing Interface) layer to the apps that support it
| Name | Category | Description |
|---|---|---|
| abinit | sci-physics | Find total energy, charge density and electronic structure using density functional theory |
| abyss | sci-biology | Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler |
| ambertools | sci-chemistry | A suite for carrying out complete molecular mechanics investigations |
| apbs | sci-chemistry | For evaluation of electrostatic properties of nanoscale biomolecular systems |
| arpack | sci-libs | Arnoldi package library to solve large scale eigenvalue problems. |
| ball | sci-chemistry | Biochemical Algorithms Library |
| boost | dev-libs | Boost Libraries for C++ |
| dmtcp | sys-apps | DMTCP is the Distributed MultiThreaded Checkpointing tool. |
| espresso | sci-physics | Extensible Simulation Package for Research on Soft matter |
| fftw | sci-libs | Fast C library for the Discrete Fourier Transform |
| flann | sci-libs | Library for performing fast approximate nearest neighbor searches in high dimensional spaces |
| gamess | sci-chemistry | A powerful quantum chemistry package |
| gerris | sci-libs | Gerris Flow Solver |
| gibbs | sci-biology | Identify motifs, conserved regions, in DNA or protein sequences |
| gromacs | sci-chemistry | The ultimate molecular dynamics simulation package |
| hdf5 | sci-libs | General purpose library and file format for storing scientific data |
| hmmer | sci-biology | Sequence analysis using profile hidden Markov models |
| hypre | sci-libs | Parallel matrix preconditioners library |
| infernal | sci-biology | Inference of RNA alignments |
| johntheripper | app-crypt | fast password cracker |